Identification

Title

Operational taxonomic units for soil eukaryotes in the rivers Wolf and Tamar catchments

Abstract

This dataset contains operational taxonomic units for soil eukaryotes from the Wolf and Tamar catchments . A range of soils were targeted from the Tamar region comprising a range of land uses. Approximate location of sampling sites was determined from maps to provide good spatial coverage of the catchment. Exact sites were determined in the field, considering accessibility and other logistic, and soils taken. The exact location of each sample site was determined using a Garmin GPS12. Soil samples were kept in the cold and removed to the laboratory for analyses. Full details about this dataset can be found at https://doi.org/10.5285/4bf6228f-ce3d-449e-9438-c4b5c8291256

Resource type

dataset

Resource locator

https://data-package.ceh.ac.uk/sd/4bf6228f-ce3d-449e-9438-c4b5c8291256.zip

description: Supporting information available to assist in re-use of this dataset'

function: information

https://data-package.ceh.ac.uk/data/4bf6228f-ce3d-449e-9438-c4b5c8291256

description: Get a copy of this data

function: download

Unique resource identifier

code

1395928798914

codeSpace

CEH:EIDC:

Dataset language

eng

Spatial reference system

code identifying the spatial reference system

Classification of spatial data and services

Topic category

biota

environment

inlandWaters

location

Keywords

Keyword set

keyword value

Environmental Monitoring Facilities

originating controlled vocabulary

title

GEMET - INSPIRE themes, version 1.0

reference date

date type

publication

effective date

2008-06-01

Geographic location

West bounding longitude

-4.307

East bounding longitude

-4.191

North bounding latitude

50.737

South bounding latitude

50.533

Temporal reference

Temporal extent

Begin position

2013-10-01

End position

2014-03-20

Dataset reference date

date type

publication

effective date

2014-05-01

Frequency of update

unknown

Quality and validity

Lineage

Samples were kept in the cold and removed to the laboratory for analyses. DNA was extracted from all soil and epilithon samples using the MOBIO Powersoil 96 well DNA extraction kit. DNA was quality checked for purity and yield prior to submission for 454 pyrosequencing to assess both bacterial and eukaryotic biodiversity within each sample. Following bioinformatic sequence processing, sequencing were clustered into operational taxonomic units (OTU) and the data tables display the percentage of each OTU within each sample.

Conformity

Conformity report

specification

title

Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services

reference date

date type

publication

effective date

2010-12-08

degree

explanation

Data format

name of format

Comma-separated values (CSV)

version of format

Constraints related to access and use

Constraint set

Limitations on public access

Constraint set

Limitations on public access

Constraint set

Limitations on public access

Constraint set

Limitations on public access

If you reuse this data, you should cite: Griffiths, R., Pywell, R.F., Peyton, J., Nuttall, P., Sarlej, R., Thomson, B. (2014). Operational taxonomic units for soil eukaryotes in the rivers Wolf and Tamar catchments. NERC Environmental Information Data Centre https://doi.org/10.5285/4bf6228f-ce3d-449e-9438-c4b5c8291256

Responsible organisations

Responsible party

organisation name

email address

enquiries@ceh.ac.uk

responsible party role

author

Responsible party

organisation name

email address

enquiries@ceh.ac.uk

web address

https://orcid.org/0000-0001-6431-9959

description: ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers.

function: information

responsible party role

author

Responsible party

organisation name

email address

enquiries@ceh.ac.uk

Metadata point of contact

organisation name

full postal address

Lancaster Environment Centre, Library Avenue, Bailrigg

Lancaster

LA1 4AP

email address

info@eidc.ac.uk

web address

https://eidc.ac.uk/

description: The Environmental Information Data Centre (EIDC) is the UK's national data centre for terrestrial and freshwater sciences.

function: information

responsible party role

pointOfContact

Metadata date

2024-02-27T16:24:26

Metadata language

eng