Identification

Title

Model estimates of topsoil microbes [Countryside Survey]

Abstract

Topsoil microbe data - Bacteria. Data is representative of 0 - 15 cm soil depth and includes bacterial community structure as assessed by ordination scores, Shannon diversity index and Simpson diversity index. Over 1000 samples from 233 1km x 1km squares across Great Britain were sampled in 2007 and analysed. See Emmett et al. 2010 for further details of sampling and Griffiths et al. 2011 for further details of methods. Estimates of mean values within selected habitats and parent material characteristics across GB were made using Countryside Survey (CS) data from 2007 using a mixed model approach. The estimated means of habitat/parent material combinations using 2007 data are modelled on dominant habitat and parent material characteristics derived from the Land Cover Map 2007 and Parent Material Model 2009, respectively. The parent material characteristic used was that which minimised AIC in each model (see dataset documentation). Please see Scott, 2008 for further details of similar statistical analysis. Areas, such as urban and littoral rock, are not sampled by CS and therefore have no associated data. Also, in some circumstances sample sizes for particular habitat/parent material combinations were insufficient to estimate mean values. References: Emmett, B.A., Frogbrook, Z.L., Chamberlain P.M., Griffiths R., Pickup R., Poskitt, J., Reynolds B., Rowe E., Rowland P., Spurgeon D., Wilson J., Wood, C.M. (2008). Countryside Survey Technical Report No.03/07: Soils Manual. Centre for Ecology & Hydrology. http://nora.nerc.ac.uk/id/eprint/5201/1/CS_UK_2007_TR3%5B1%5D.pdf Griffiths, R.I.; Thomson, B.C.; James, P.; Bell, T.; Bailey, M.; Whiteley, A.S. (2011). The bacterial biogeography of British soils. Environmental Microbiology, 13 (6). 1642-1654. https://doi.org/10.1111/j.1462-2920.2011.02480.x Scott, W.A. (2008). CS Technical Report No.4/07: Statistical Report. Centre for Ecology & Hydrology. http://nora.nerc.ac.uk/id/eprint/5202/1/CS_UK_2007_TR4%5B1%5D.pdf Full details about this dataset can be found at https://doi.org/10.5285/53210c27-87fc-46e4-a3d6-e731003dc541

Resource type

dataset

Resource locator

https://data-package.ceh.ac.uk/data/53210c27-87fc-46e4-a3d6-e731003dc541

description: Download a copy of this data

function: download

https://data-package.ceh.ac.uk/sd/53210c27-87fc-46e4-a3d6-e731003dc541.zip

description: Supporting information available to assist in re-use of this dataset

function: information

https://catalogue.ceh.ac.uk/maps/6372b558-ba64-4fbe-8766-019e01535b37?request=getCapabilities&service=wms

description: This link returns a WMS GetCapabilities response in XML format

Unique resource identifier

code

1395932335486

codeSpace

CEH:EIDC:

Dataset language

eng

Spatial reference system

code identifying the spatial reference system

Classification of spatial data and services

Topic category

environment

Keywords

Keyword set

keyword value

Soil

originating controlled vocabulary

title

GEMET - INSPIRE themes, version 1.0

reference date

date type

publication

effective date

2008-06-01

Keyword set

keyword value

Broad Habitat

Countryside Survey

Parent Material Model

Simpson diversity index

Shannon diversity index

Non-metric Multidimensional Scaling ordination (NMDS)

Geographic location

West bounding longitude

-8.67

East bounding longitude

3.04

North bounding latitude

59.85

South bounding latitude

49.41

Temporal reference

Temporal extent

Begin position

2007-01-01

End position

2007-12-31

Dataset reference date

date type

publication

effective date

2014-06-26

Frequency of update

notPlanned

Quality and validity

Lineage

Data used are taken from the Countryside Survey Soils Report (Emmett et al. 2010) which can be found at http://nora.nerc.ac.uk/id/eprint/9354/1/CS_UK_2007_TR9.pdf

Conformity

Conformity report

specification

title

Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services

reference date

date type

publication

effective date

2010-12-08

degree

explanation

Data format

name of format

ESRI Shapefile format

version of format

Constraints related to access and use

Constraint set

Limitations on public access

Constraint set

Limitations on public access

Constraint set

Limitations on public access

Constraint set

Limitations on public access

If you reuse this data, you should cite: Henrys, P.A., Keith, A.M., Robinson, D.A., Emmett, B.A. (2014). Model estimates of topsoil microbes [Countryside Survey]. NERC Environmental Information Data Centre https://doi.org/10.5285/53210c27-87fc-46e4-a3d6-e731003dc541

publisher

Metadata on metadata

Metadata point of contact

organisation name

Environmental Information Data Centre

full postal address

Lancaster Environment Centre, Library Avenue, Bailrigg

Lancaster

LA1 4AP

email address

info@eidc.ac.uk

responsible party role

pointOfContact

Metadata date

2022-05-20T10:42:21

Metadata language

eng