Identification

Title

Species Distribution - A verified distribution model for the lesser sandeel (Ammodytes marinus)

Abstract

The lesser sandeel Ammodytes marinus is a key component of the North East Atlantic ecosystem but little is known about its distribution outside of fished areas. In this study, species distribution models were developed to predict the occurrence and density of sandeels in parts of the North Sea and Celtic Seas regions. A hurdle model was found to be the best fitting model with the highest predictive performance; model evaluation with independent data demonstrated that it had significant discrimination ability across the study region. The distribution model helps refine past inferences about sandeel availability to predators and indicates to marine planners potential areas where anthropogenic impacts should be considered SDM Metadata sandeel: An excel file containing detailed metadata relating to the development of the species distribution model using the checklist based on that published in Feng et al. (2019) A checklist for maximising reproducibility of ecological niche models. Nature ecology & evolution. Four geotiffs: CelticSeas_ProbPres - probability of presence of buried sandeel in the Celtic Seas study region. CelticSeas_PredictedDensity - predicted density of buried sandeel in the Celtic Seas study region (number per m^2). NorthSea_ProbPres - probability of presence of buried sandeel in the North Sea study region. NorthSea_PredictedDensity - predicted density of buried sandeel in the North Sea study region (number per m^2).

Resource type

dataset

Resource locator

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/ows?token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&service=wms&version=1.3.0&request=GetCapabilities

protocol: OGC:WMS-1.3.0-http-get-capabilities

function: download

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/ows?token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&service=wcs&version=1.1.0&request=getCapabilities

protocol: OGC:WCS

function: download

https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?availablelayers=1897

protocol: WWW:LINK-1.0-http--link

description: View "Lesser Sandeel (Ammodytes marinus) - Celtic Seas - Predicted density of buried sandeels (number per m^2)" on Marine Scotland Maps

function: download

https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?availablelayers=1898

protocol: WWW:LINK-1.0-http--link

description: View "Lesser Sandeel (Ammodytes marinus) – North Sea - Predicted density of buried sandeels (number per m^2)" on Marine Scotland Maps

function: download

https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?availablelayers=1899

protocol: WWW:LINK-1.0-http--link

description: View "Lesser Sandeel (Ammodytes marinus) – North Sea - Probability of presence of buried sandeel" on Marine Scotland Maps

function: download

https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?availablelayers=1900

protocol: WWW:LINK-1.0-http--link

description: View "Lesser Sandeel (Ammodytes marinus) – Celtic Seas - Probability of presence of buried sandeel" on Marine Scotland Maps

function: download

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_celtic_seas_predicted_density&crs=EPSG:4326&format=image/tiff

protocol: WWW:DOWNLOAD-1.0-http--download

name: species_distribution_lesser_sandeels_celtic_seas_predicted_density

description: Download "Lesser Sandeel (Ammodytes marinus) - Celtic Seas - Predicted density of buried sandeels (number per m^2)" as geotiff on WGS84 datum

function: download

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_celtic_seas_probability_presence&crs=EPSG:4326&format=image/tiff

protocol: WWW:DOWNLOAD-1.0-http--download

name: species_distribution_lesser_sandeels_celtic_seas_probability_presence

description: Download "Lesser Sandeel (Ammodytes marinus) – Celtic Seas - Probability of presence of buried sandeel" as geotiff on WSG84 datum

function: download

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_north_sea_predicted_density&crs=EPSG:4326&format=image/tiff

protocol: WWW:DOWNLOAD-1.0-http--download

name: species_distribution_lesser_sandeels_north_sea_predicted_density

description: Download "Lesser Sandeel (Ammodytes marinus) – North Sea - Predicted density of buried sandeels (number per m^2)" as geotiff on WGS84 datum

function: download

https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_north_sea_probability_presence&crs=EPSG:4326&format=image/tiff

protocol: WWW:DOWNLOAD-1.0-http--download

name: species_distribution_lesser_sandeels_north_sea_probability_presence

description: Download "Lesser Sandeel (Ammodytes marinus) – North Sea - Probability of presence of buried sandeel" as geotiff on WGS84 datum

function: download

Unique resource identifier

code

Marine_Scotland_FishDAC_12377

codeSpace

Dataset language

eng

Spatial reference system

authority code

OGP

code identifying the spatial reference system

urn:ogc:def:crs:EPSG::4326

Additional information source

Langton, Boulcott & Wright (2021) A verified distribution model for the lesser sandeel Ammodytes marinus. Marine Ecology Progress Series. https://doi.org/10.3354/meps13693

Classification of spatial data and services

Topic category

biota

environment

Keywords

Keyword set

keyword value

Keyword set

keyword value

Fish taxonomy-related abundance per unit area of the bed

Habitat extent

originating controlled vocabulary

title

SeaDataNet Parameter Discovery Vocabulary

reference date

date type

revision

effective date

2018-12-12

Keyword set

keyword value

Species distribution

originating controlled vocabulary

title

GEMET - INSPIRE themes, version 1.0

reference date

date type

publication

effective date

2008-06-01

Keyword set

keyword value

Biological diversity maintained

Marine food webs are at normal abundance and diversity

originating controlled vocabulary

title

Marine Strategy Framework Directive descriptors

reference date

date type

revision

effective date

2017-02-25

Geographic location

West bounding longitude

-9.953613

East bounding longitude

3.405762

North bounding latitude

61.19621

South bounding latitude

52.12

Extent

Extent group

authority code

title

SeaDataNet vertical extent keywords

reference date

date type

revision

effective date

2010-01-01

code identifying the extent

The water column that is significantly influenced by the seabed, which is broader in deep ocean than in shelf seas. Guideline approximation is bottom 10m of oceans and bottom 5% of shelf (<200m) seas.

Temporal reference

Temporal extent

Begin position

2020-04-01

End position

2021-06-10

Dataset reference date

date type

publication

effective date

2021-06-10

Frequency of update

unknown

Quality and validity

Lineage

Source of occurrence data: Holland et al. (2005). Identifying sandeel Ammodytes marinus sediment habitat preferences in the marine environment. MEPS. 303: 269-282. Obtained by personal communication. Sources of environmental data: Emodnet Bathymetry Portal - (https://portal.emodnet-bathymetry.eu/#) Grids D3 and D4 downloaded on 10th Jan 2019. Depth and slope were extracted from Emodnet Bathymetry data using terrain function in the Raster package in R. Sediment point data from BGS (http://www.bgs.ac.uk/GeoIndex/offshore.htm) were downloaded in January 2019 INFOMAR sediment data downloaded June 2019 Marine recorder version Feb 2019 was downloaded April 2019 Layers of percentage sand, mud and gravel were interpolated from the point records by inverse distance weighting. The analysis was done using a Hurdle model fitted with the countreg package. All analyses were undertaken in R version 3.6.2.

Conformity

Data format

name of format

version of format

Constraints related to access and use

Constraint set

Use constraints

This project was supported by the EU's INTERREG VA Programme, managed by the Special EU Programmes Body (SEUPB). The views and opinions expressed in this study do not necessarily reflect those of the European Commission of the SEUPB.

Constraint set

Use constraints

The following attribution statement must be used: Contains information from the Scottish Government licensed under the Open Government Licence v3.0.

Constraint set

Use constraints

If you use this data, please cite Langton, R., Boulcott, P. and Wright P.J. (2021) A verified distribution model for the lesser sandeel Ammodytes marinus. Marine Ecology Progress Series. https://doi.org/10.3354/meps13693

Constraint set

Limitations on public access

no limitations to public access

Responsible organisations

Responsible party

organisation name

Scottish Government

full postal address

Mailpoint 11, Area 1B South, Victoria Quay

Edinburgh

EH6 6QQ

United Kingdom

telephone number

+44 (0)300 244 4000

email address

marine.gis@gov.scot

responsible party role

pointOfContact

Responsible party

organisation name

Scottish Government

full postal address

Mailpoint 11, Area 1B South, Victoria Quay

Edinburgh

EH6 6QQ

United Kingdom

telephone number

+44 (0)300 244 4000

email address

marine.gis@gov.scot

responsible party role

custodian

Responsible party

organisation name

Scottish Government

full postal address

Mailpoint 11, Area 1B South, Victoria Quay

Edinburgh

EH6 6QQ

United Kingdom

telephone number

+44 (0)300 244 4000

email address

marine.gis@gov.scot

responsible party role

distributor

Responsible party

organisation name

Scottish Government

full postal address

Mailpoint 11, Area 1B South, Victoria Quay

Edinburgh

EH6 6QQ

United Kingdom

telephone number

+44 (0)300 244 4000

email address

marine.gis@gov.scot

responsible party role

originator

Metadata on metadata

Metadata point of contact

organisation name

Scottish Government

telephone number

+44 (0)300 244 4000

email address

marine.gis@gov.scot

responsible party role

pointOfContact

Metadata date

2023-09-12

Metadata language

eng