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Model simulations of pathogen dissemination in four European bivalve production areas

Hydrodynamic models were constructed for four mollusc shellfish production sites which represented a range of bathymetry and climatic conditions: Dungarven Bay (Republic of Ireland), Bay of Brest...

Multi-drug resistant bacteria in agricultural soil

This dataset identified bacteria able to grow in the presence of several Antibiotics in a British agricultural soil, by DNA stable isotope probing (SIP). The dataset was created with samples of the...

Faecal bacteria concentration in the River Wharfe from 2019 to 2021

This dataset contains faecal bacteria data (mainly E. coli but also some Intestinal enterococci) for the River Wharfe and its tributaries in Yorkshire. They were collected and analysed as part of...

Image and numerical data detailing interactions between metal reducing bacteria and metals (NERC grant NE/J024732/1)

These data show images recorded using a variety of methods of a model system of bacterial metal reduction. In all cases the bacteria grew from a pure culture of Geobacter sulfurreducens, and grew...

Operational taxonomic units for soil bacteria in the Wolf and Tamar catchments

This dataset contains operational taxonomic units for soil bacteria collected from various land use categories in the Wolf and Tamar catchments in South west England. A range of soils were targeted...

Antimicrobial Resistance surveillance data

Antimicrobial Resistance (AMR) data gives the results of antimicrobial sensitivity testing on Salmonella isolates from samples collected from poultry and other animal species under the statutory...

Temporal and geographic distribution of multidrug-resistant human bacterial pathogens in urban waste piles, Blantyre, Malawi, 2022-2023

This dataset contains information relating to the temporal and geographic distribution of clinically relevant bacterial pathogens on waste materials (plastics, fabrics, organics) within urban waste...

Concentrations and antibiotic resistance of faecal indicator organisms and human pathogens associated with sewage waste on Scottish beaches, 2021

The data includes concentrations of faecal indicator organisms isolated from the plastic waste and natural substrates found on Scottish beaches, as well as the antibiotic resistance of selected...

Nurdle characteristics with associated bacterial concentrations and virulence of Klebsiella isolates from Scottish beaches, 2022

This dataset holds realistic environmental concentrations of potential pathogens colonising microplastic beads (nurdles) collected from ten Scottish beaches. Observed measures include...

Standardised counts of bacteria, fungi and micro eukaryotes abundances across geo-linked sampling locations on grassland, UK (2016)

The data consist of standardised counts of taxon abundances (bacteria, fungi and micro eukaryotes) from soil samples collected from paired intensive and extensive grassland systems, including low...

High spatial resolution seasonal distributions of faecally-derived waterborne and sediment bacteria in standing waters, Glasgow, UK, 2016-2017

This dataset contains information about water quality based on faecal indicators at 15 lakes in the Greater Glasgow conurbation, Scotland. Lakes were sampled in winter (2016/17) and summer (2017)...

Operational taxonomic units for epilithon bacteria in the rivers Wolf and Tamar catchments

This dataset contains operational taxonomic units for epilithon (water samples): Approximate location of sampling sites was determined from maps to provide good spatial coverage of the Wold River...

Lipid biomarker data relating to anammox bacteria in sediment records containing Mediterranean sapropels (NERC Grant NE/N011112/1)

Spreadsheet containing three tabs of biomarker concentration data for three Mediterranean sapropel records. Core LC21 was collected at 1522m water depth in the Aegean Sea by the R/V Marion...

Clondiag bee array

Work on detection for quarantine DNA sequences, used to detect bee pathogens.

Predictive diagnostics for onions

Development of a predictive diagnostics package for soil borne pathogens of onions and leek crops

Compositional and growth assay data for tree-hole bacteria communities under differing pH conditions, sampled summer 2021, Wytham Woods, Oxford

The data comprises both compositional data and growth assay data from an experiment of wild bacterial communities in Wytham Woods, Oxford. The communities live in puddles of water in tree-holes...

Phytophthora ramorum genotypes

Characterisation of different P. ramorum genotypes . To compare fitness characters of growth rate, pathogenicity and sporulation potential of the key genotypes.

Pest Reference List

A reference list of organisms (bacteria, fungi, insects, nematodes, viruses etc), their preferred name, synonyms, common names, pest status and distribution

Viable bioaerosol and particulate data from four sites representing different levels of endotoxin exposure in south east England, 2016-2018

The dataset was collected between 2016-2018. A range of different environments were sampled including urban and rural sites in the South East of England, a compost facility in the East of England...

Are Bacterial-Like Structures on Silurian and Devonian Plant Fossils Silurian or Devonian Microfossils?

Spherical and rod-shaped structures of bacterial dimensions found on coalified Upper Silurian and Lower Devonian mesofossils including spores, cuticles and coprolites will be subjected to a number...