The outputs of the Aquaculture Network Disease Model (AquaNet-Mod), predicting
the epidemiological and economic burden of viral haemorrhagic septicaemia in
English and Welsh salmonid farms under various disease control scenarios.
Included are outputs of the AquaNet-Mod from FY22-23. The code for generating
these outputs can be found at the aquanet_ and aquanet-mod_ GitHub
repositories.
For the summary data, there are .csv files which give the epidemic size,
duration and cost for each simulation. For the epidemic size and duration, the
files also give an indication as to whether an epidemic died out or timed out.
The summary data contains five zipped output sub-files:
( 1.)scenarios - Contains the outputs of disease control scenarios described
in Guilder et al. (in prep) and Kennerley et al. (in prep).
( 2.)fishery_cull - Contains the outputs of the baseline disease control
scenario, with different proportions of fisheries able to cull.
( 3.)fallow_period - Contains the outputs of the baseline disease control
scenario, with different lengths of fallow period.
( 4.)n_sims - Contains the outputs of baseline disease control scenario, with
a different number of simulations. Note: doesn’t contain economic data.
( 5.)sensitivity_tests - Contains the outputs of model sensitivity tests
described in Guilder et al. (in prep).
.. _aquanet:
https://github.com/CefasRepRes/aquanet
.. _aquanet-mod:
https://github.com/CefasRepRes/aquanet-mod
