Laboratory data for experimental exposure of Pacific Oysters (Crassostrea (Magallana) gigas) to Ostreid herpesvirus (OsHV-1) in 2016

Published by:
Marine Environmental Data & Information Network
Last updated:
05 May 2025
Topic:
Not added
Licence:
None

Summary

Laboratory data for experimental exposure of 1,000 Pacific Oysters (Crassostrea (Magallana) gigas) to Ostreid herpesvirus (OsHV-1) in 2016 for the purpose of collecting survival vs mortality and viral load data to estimate heritability of resistance to Ostreid herpesvirus (OsHV-1) using single nucleotide polymorphism (SNP) analysis of the challenged oysters.

The dataset take the form of:

  • Quantitative PCR (qPCR) data for Pacific oysters challenged with OsHV-1. V-
    iral load was measured in viral copies per mg of tissue, AND the raw data is CT (cycle threshold) values.
  • Survival and mortality data for the disease challenge, and the position of each oyster within the challenge system
  • Disease challenge parameters, including feeding, temperature and water quality measurements
  • Illumina MiSeq derived sequencing data produced from a single oyster experimentally infected with OsHV-1

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Data links

Link to the data Format File added Data preview
Cefas Data Portal N/A 05 May 2025 Not available

Additional information

View additional metadata
Added to data.gov.uk
2025-04-30
Access contraints
Not specified
Harvest GUID
CEFASaa56c787-3714-47c3-9253-80da10586242
Extent
Latitude: 52.4595° to °
Longitude: 1.73881° to 1.74086°
Spatial reference system
Dataset reference date
2024-08-21 (publication)
2025-04-30 (revision)
2024-08-21 (creation)
Frequency of update
notPlanned
Responsible party
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) (originator, custodian, distributor, owner)
ISO 19139 resource type
dataset
Metadata language
eng
Source Metadata
XML
HTML

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