Modelled predictions of annual pollutant loads in rivers from agricultural source areas for Scotland, reported at Water Framework Directive (WFD) catchment scale. The modelled pollutants include total phosphorous, nitrate (NO3-N), faecal indicator organisms (FIOs), suspended solids, methane (CH4) and nitrous oxide (N2O) gas emissions. The agricultural source areas include arable land, improved grassland, rough grazing land and others (e.g. steadings, tracks and other non-field losses). Modelled predictions account for current (c. 2012) implementation of General Binding Rules, Nitrate Vulnerable Zone Action Programme and a number of SRDP options. The values specify pollutant losses in 10^6 colony forming units (cfu) per year for FIOs and kilograms per year for the other pollutants. Full details about this dataset can be found at https://doi.org/10.5285/d4d5a10e-1612-4bb5-97b2-2b850cccdcb2
